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Coffee Genome Hub

Website URL: 
http://coffee-genome.org/

The Coffee Genome Hub is an integrated web-based database providing centralized access to coffee community genomics, genetics and breeding data and analysis tools to facilitate basic, translational and applied research in coffee.

Referent(s): 
Philippe Lashermes, Alexis Dereeper, Gaëtan Droc
Member(s): 
Mathieu Rouard, Valentin Guignon, Stéphanie Bocs
Partner(s): 
IRD, CIRAD, Genoscope, Bioversity International
Funding: 

The research was funded by the French National Research Agency, Australian Research Council, Natural Sciences and Engineering Research Council of Canada, CNR-ENEA Agrifood Project of Italy, Funding Authority for Studies and Projects (FINEP) of Brazil, National Institutes of Science and Technology (INCT) of Brazil, the U.S. National Science Foundation and the College of Arts and Science, University at Buffalo.

Publication(s): 
Dereeper A, Bocs S, Rouard M, Guignon V, Ravel S, Tranchant-Dubreuil C, et al. The coffee genome hub: a resource for coffee genomes. Nucleic Acids Res. 2014. Abstract
Denoeud F, Carretero-Paulet L, Dereeper A, Droc G, Guyot R, Pietrella M, et al. The coffee genome provides insight into the convergent evolution of caffeine biosynthesis. Science. 2014;345(6201):1181-4. Abstract
Species: 
Coffee
Data types: 
Gene, Gene families, Genome Hub, Marker, Protein, SNP, Transcript