South Green

AgroLD : The Agronomic Linked Data knowledge graph database for plant molecular data

Data types:

Gene, Gene families, Genotype, Marker, Phenotype, Protein, QTL, SNP, Transcript

Banana Genome Hub : the integrated crop portal for Musa

Data types:

Gene, Gene families, Genome Hub, Genotype, Map, Marker, Protein, SNP, Transcript

Cassava Genome Hub : the integrated portal for cassava

Data types:

Gene, Genome Hub, Genotype, Map, Marker, Phenotype, QTL, SNP

Cocoa Genome Hub : a Web portal for crossing cocoa phenotypic, genetic and genomic data from ICGD and TropGeneDB databases

Data types:

Genome Hub, Genotype, Map, Marker, Phenotype, QTL, SNP

Coffee Genome Hub : the integrated portal for coffee

Data types:

Gene, Gene families, Genome Hub, Marker, Protein, SNP, Transcript

ESTtik : Expressed Sequence Tag Treatment and Investigation Kit

Data types:

EURIGEN : Eurigen Database manages genetic, phenotypic and genomic information on rice working collections of European institutions

Data types:

Genotype, Map, Marker, Phenotype, QTL

EURoot : the database on QTLs, genes and mutants involved in root growth under stress of the EURoot project "Enhancing resource uptake from roots under stress in cereal crops"

Data types:

Gene, Map, Marker, QTL

GenDiversity : a query and analysis application combining genotyping and passport data from diverse crop data sources

Gigwa : Gigwa helps managing, sharing, and exploring high density genotyping data (typically VCF files)

Data types:

Gene, Genotype, Marker, Phenotype, SNP

GNPAnnotDB : a generic Community Annotation System

Data types:

Gene, Marker, Protein, SNP, Transcript

Grass Genome Hub : An Information System for comparative and functional genomics dedicated to Grasses species

Data types:

Gene, Gene families, Genome Hub, Protein, SNP, Transcript

GreenPhylDB : a curated catalogue of plant gene families for a quest for orthologs

Data types:

Gene, Gene families, Protein

OryGenesDB : Oryza Genes Database

Data types:

Gene, Marker, QTL, SNP

Oryza Tag Line : Oryza Tag Line database

Data types:

Gene, Phenotype

Rice Genome Hub : an integrative genome information system that allows centralized access to genomics and genetics data

Data types:

Gene, Genome Hub, Protein, SNP, Transcript

SNiPlayDB : SNP and polymorphism analysis

Data types:

Gene, Genotype, Marker, SNP

Sugarcane Genome Hub : The Sugarcane Genome Hub is an integrated web-based database providing centralized access to the sugarcane reference genome sequences and genomic resources.

Data types:

Gene, Genome Hub, Map, Marker

TropGeneDB : gene database for tropical plants

Data types:

Gene, Genotype, Map, Marker, Phenotype, QTL, SNP