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Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. Gigwa—Genotype investigator for genome-wide analyses. Gigascience. 2016;5:25.
Petitot A-, Dereeper A, Agbessi M, Da Silva C, Guy J, Ardisson M, et al. Dual RNA-seq reveals Meloidogyne graminicola transcriptome and candidate effectors during the interaction with rice plants. Molecular plant pathology. 2016;17:860-74.
Dereeper A, Homa F, Andres G, Sempéré G, Sarah G, Hueber Y, et al. SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations. Nucleic Acids Research. 2015.
Bocs S, Dereeper A, Gayraud T, Jamilloux V, Lashermes P, Guyot R. Transposable Elements in the Robusta Coffee Genome (Coffea canephora). San Diego; 2014.
Denoeud F, Carretero-Paulet L, Dereeper A, Droc G, Guyot R, Pietrella M, et al. The coffee genome provides insight into the convergent evolution of caffeine biosynthesis. Science. 2014;345(6201):1181-4. Abstract
Dereeper A, Bocs S, Rouard M, Guignon V, Ravel S, Tranchant-Dubreuil C, et al. The coffee genome hub: a resource for coffee genomes. Nucleic Acids Res. 2014. Abstract
Pérez-Quintero AL, Rodriguez-R LM, Dereeper A, López C, Koebnik R, Szurek B, et al. An improved method for TAL effectors DNA-binding sites prediction reveals functional convergence in TAL repertoires of Xanthomonas oryzae strains. PLoS ONE. 2013;8(7):e68464. Abstract
Riahi L, Zoghlami N, Fournier-Level A, Dereeper A, Le Cunff L, Laucou V, et al. Characterization of single nucleotide polymorphism in Tunisian grapevine genome and their potential for population genetics and evolutionary studies. Genetic Resources and Crop Evolution. 2013;60:1139-51.
Riahi L, Zoghlami N, Dereeper A, Laucou V, Mliki A, This P. Single nucleotide polymorphism and haplotype diversity of the gene NAC4 in grapevine.. 2013;43:718-24.
Droc G, Larivière D, Guignon V, Yahiaoui N, This D, Garsmeur O, et al. The Banana Genome Hub. Database. 2013;2013. Abstract