Petitot A-, Dereeper A, Agbessi M, Da Silva C, Guy J, Ardisson M, et al. Dual RNA-seq reveals Meloidogyne graminicola transcriptome and candidate effectors during the interaction with rice plants. Molecular plant pathology. 2016;17:860-74.
Sempéré G, Philippe F, Dereeper A, Ruiz M, Sarah G, Larmande P. Gigwa—Genotype investigator for genome-wide analyses. Gigascience. 2016;5:25.
Dereeper A, Homa F, Andres G, Sempéré G, Sarah G, Hueber Y, et al. SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations. Nucleic Acids Research. 2015.
Denoeud F, Carretero-Paulet L, Dereeper A, Droc G, Guyot R, Pietrella M, et al. The coffee genome provides insight into the convergent evolution of caffeine biosynthesis. Science. 2014;345(6201):1181-4. Abstract
Dereeper A, Bocs S, Rouard M, Guignon V, Ravel S, Tranchant-Dubreuil C, et al. The coffee genome hub: a resource for coffee genomes. Nucleic Acids Res. 2014. Abstract
Riahi L, Ayari B, Zoghlami N, Dereeper A, Laucou V, Mliki A, et al. High efficiency and informativeness of a set of SNP molecular markers in Tunisian local grapevines discrimination. Biochemical Systematics and Ecology. 2013;51:175-83.
Riahi L, Zoghlami N, Fournier-Level A, Dereeper A, Le Cunff L, Laucou V, et al. Characterization of single nucleotide polymorphism in Tunisian grapevine genome and their potential for population genetics and evolutionary studies. Genetic Resources and Crop Evolution. 2013;60:1139-51.
