Bibliography
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2009
Droc G, Perin C, Fromentin S, Larmande P.
2009. {OryGenesDB} 2008 update: database interoperability for functional genomics of rice. Nucleic Acids Research. 37:D992–D995.
Droc G, Périn C, Fromentin S, Larmande P.
2009. OryGenesDB 2008 update: database interoperability for functional genomics of rice. Nucleic Acids Research. 37(Database i):D992-5-D992-5. Abstract
Larmande P, Droc G, Fromentin S, Périn C.
2009. Orylink: A Personalized Integrated System for Functional Genomic Analysis. International Plant and Animal Genome Conference.
Petit J, Bourgeois E, Stenger W, Bès M, Droc G, Meynard D, Courtois B, Ghesquière A, Sabot F, Panaud O et al..
2009. Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus. Molecular Genetics and Genomics. 282(6):633-652.
2008
Vergne E, Ballini E, Droc G, Tharreau D, Jean-Loup, Morel J-B.
2008. ARCHIPELAGO: a dedicated resource for exploiting past, present, and future genomic data on disease resistance regulation in rice. Molecular Plant-Microbe Interactions: MPMI. 21(7):869-78. Abstract
Risterucci AM, Nansot G, Grangeon R, Lepitre V, Dereeper A, Argout X, Ruiz M, Billotte N.
2008. Development of microsatellite (SSR) markers using the SAT software. 2nd International Symposium on Guava and Other Myrtaceae.
Argout X, Fouet O, Wincker P, Gramacho K, Legavre T, Sabau X, Risterucci AM, Da Silva C, Loor G, Cascardo J et al..
2008. A First Step In The Understanding Of The Cocoa Transcriptome: Analysis Of An Exhaustive Dataset Of ESTs On Theobroma cacao Generated From Various Tissues And Under Various Conditions.. Plant & Animal Genomes XVI Conference.
von Korff M, Grando S, Del Greco A, This D, Baum M, Ceccarelli S.
2008. Quantitative trait loci associated with adaptation to Mediterranean dryland conditions in barley.. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 117(5):653-69. Abstract
Larmande P, Gay C, Lorieux M, Périn C, Bouniol M, Droc G, Sallaud C, Perez P, Barnola I, Biderre-Petit C et al..
2008. Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library.. Nucleic acids research. 36(Database issue):D1022-7. Abstract
Pelletier E, Kreimeyer A, Bocs S, Rouy Z, Gyapay G, Chouari R, Rivière D, Ganesan A, Daegelen P, Sghir A et al..
2008. "Candidatus Cloacamonas acidaminovorans": genome sequence reconstruction provides a first glimpse of a new bacterial division.. Journal of bacteriology. 190(7):2572-9. Abstract
Bruskiewich R, Senger M, Davenport G, Ruiz M, Rouard M, Hazekamp T, Takeya M, Doi K, Satoh K, Costa M et al..
2008. The generation challenge programme platform: semantic standards and workbench for crop science.. International journal of plant genomics. 2008:369601. Abstract
Lescot M, Piffanelli P, Ciampi AY, Ruiz M, Blanc G, Leebens-Mack J, da Silva FR, Santos CMR, D'Hont A, Garsmeur O et al..
2008. Insights into the Musa genome: syntenic relationships to rice and between Musa species.. BMC genomics. 9:58. Abstract
Luquet D, Clément-Vidal A, Fabre D, This D, Sonderegger N, Dingkuhn M.
2008. Orchestration of transpiration, growth and carbohydrate dynamics in rice during a dry-down cycle. Functional Plant Biology. 35(8):689-704. Abstract
Conte MG, Gaillard S, Droc G, Périn C.
2008. Phylogenomics of plant genomes: a methodology for genome-wide searches for orthologs in plants.. BMC genomics. 9:183. Abstract
Ballini E, Morel J-B, Droc G, Price A, Courtois B, Jean-Loup, Tharreau D.
2008. A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance. Molecular Plant-Microbe Interactions: MPMI. 21:859–68. Abstract
Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, Dufayard JF, Guindon S, Lefort V, Lescot M et al..
2008. Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucl. Acids Res.. 36:W465-469. Abstract
2007
Larmande P, Gay C, Lorieux M, Perin C, Bouniol M, Droc G, Sallaud C, Perez P, Barnola I, Biderre-Petit C et al..
2007. Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library. Nucleic Acids Research. 36:D1022–D1027.
Piffanelli P, Droc G, Mieulet D, Lanau N, Bès M, Bourgeois E, Rouvière C, Gavory F, Cruaud C, Ghesquière A et al..
2007. Large-scale characterization of Tos17 insertion sites in a rice T-DNA mutant library. Plant Mol Biol. Abstract
Vergne E, Ballini E, Marques S, Mammar SB, Droc G, Gaillard S, Bourot S, DeRose R, Tharreau D, Jean-Loup et al..
2007. Early and specific gene expression triggered by rice resistance gene Pi33 in response to infection by ACE1 avirulent blast fungus. The New phytologist. 174(1):159-71. Abstract
Argout X, Ruiz M, Fouet O, Lanaud C, Wincker P, Da Silva C, Courtois B.
2007. ESTtik : a semi-automatic cDNA sequence analysis and annotation pipeline including SSR and SNP search tools.. 15th International Cocoa Research Conference. 1:501-506.
Lanaud C, Fouet O, Gramacho KP, Argout X, Legavre T, Sabau X, Risterucci AM, Wincker P, Da Silva C, Loor Solorzano RG et al..
2007. A large EST resource for theobroma cacao L. 15th Plant and Animal Genomes Conference.
Dereeper A, Argout X, Billot C, Rami JF, Ruiz M.
2007. SAT, a flexible and optimized Web application for SSR marker development. BMC Bioinformatics. 8:465-465. Abstract