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2012

Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J. 2012. Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets.. BMC plant biology. 12:18. Abstract

Piyatrakul P, Putranto R-A, Martin F, Rio M, Dessailly F, Leclercq J, Dufayard JF, Lardet L, Montoro P. 2012. Some ethylene biosynthesis and AP2/ERF genes reveal a specific pattern of expression during somatic embryogenesis in Hevea brasiliensis.. BMC plant biology. 12:244. Abstract

Carrier G, Le Cunff L, Dereeper A, Legrand D, Sabot F, Bouchez O, Audeguin L, Boursiquot J-M, This P. 2012. Transposable elements are a major cause of somatic polymorphism in Vitis vinifera L.. PloS one. 7(3):e32973. Abstract

D’Hont A, Denoeud F, Aury J-M, Baurens F-C, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M et al.. 2012. The banana (Musa acuminata) genome and the evolution of monocotyledonous plants.. Nature. 488(7410):213-7. Abstract

Maillol V, Bacilieri R, Bocs S, Boursiquot J-M, Carrier G, Dereeper A, Droc G, Fleury C, Larmande P, Lecunff L et al.. 2012. Role of Galaxy in a bioinformatic plant breeding platform. Galaxy Community Conference.

Guignon V, Droc G, Alaux M, Baurens F-C, Garsmeur O, Poiron C, Carver T, Rouard M, Bocs S. 2012. Chado controller: advanced annotation management with a community annotation system.. Bioinformatics (Oxford, England). 28(7):1054-6. Abstract

Rouard M, Carpentier SC, Bocs S, Droc G, Argout X, Roux N, Ruiz M, Pillay M, Ude G, Kole C et al.. 2012. Role of bioinformatics as a tool. Genetics, Genomics, and Breeding of Bananas. :194.

2011

Courtois B, Greco R, Bruschi G, Frouin J, Ahmadi N, Droc G, Hamelin C, Ruiz M, Evrard J-C, Katsantonis D et al.. 2011. Molecular characterization of the European rice collection in view of association mapping. Plant Genetic Resources. 9:233–235.

Ahmadi N, Negrão S, Katsantonis D, Frouin J, Ploux J, Letourmy P, Droc G, Babo P, Trindade H, Bruschi G et al.. 2011. Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra.. TAG. Theoretical and applied genetics. 123(6):881-95. Abstract

Tranbarger TJ, Dussert S, Joët T, Argout X, Summo M, Champion A, Cros D, Omore A, Nouy B, Morcillo F. 2011. Regulatory mechanisms underlying oil palm fruit mesocarp maturation, ripening, and functional specialization in lipid and carotenoid metabolism.. Plant physiology. 156(2):564-84. Abstract

Garsmeur O, Charron C, Bocs S, Jouffe V, Samain S, Couloux A, Droc G, Zini C, Glaszmann J-C, Van Sluys M-A et al.. 2011. High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane.. The New phytologist. 189(2):629-42. Abstract

Amselem J, Cuomo CA, van Kan JAL, Viaud M, Benito EP, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S et al.. 2011. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.. PLoS genetics. 7(8):e1002230. Abstract

Dievart A, Gilbert N, Droc G, Attard A, Gourgues M, Guiderdoni E, Périn C. 2011. Leucine-rich repeat receptor kinases are sporadically distributed in eukaryotic genomes.. BMC evolutionary biology. 11:367. Abstract

Dereeper A, Nicolas S, Le Cunff L, Bacilieri R, Doligez A, Peros J-P, Ruiz M, This P. 2011. SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects.. BMC bioinformatics. 12:134. Abstract

Argout X, Salse J, Aury J-M, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN et al.. 2011. The genome of Theobroma cacao. Nature Genetics. 43(2):101-108.

Ahmadi N, Negrão S, Katsantonis D, Frouin J, Ploux J, Letourmy P, Droc G, Babo P, Trindade H, Bruschi G et al.. 2011. Targeted association analysis identified japonica rice varieties achieving Na+/K+ homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra. Theoretical and Applied Genetics. 123:881-895.

Rouard M, Guignon V, Aluome C, Laporte M-A, Droc G, Walde C, Zmasek CM, Périn C, Conte MG. 2011. GreenPhylDB v2.0: comparative and functional genomics in plants.. Nucleic acids research. 39(Database issue):D1095-102. Abstract

Souza GM, Berges H, Bocs S, Casu R, D’Hont A, Ferreira JE, Henry R, Ming R, Potier B, Van Sluys M-A et al.. 2011. The Sugarcane Genome Challenge: Strategies for Sequencing a Highly Complex Genome. Tropical Plant Biology. 4:145-156.

Droc G, Ruiz M, Larmande P, Pereira A, Piffanelli P, Morel JB, Dievart A, Courtois B, Guiderdoni E, Périn C. 2011. Insertions within Os01g09550.

Droc G, Ruiz M, Larmande P, Pereira A, Piffanelli P, Morel JB, Dievart A, Courtois B, Guiderdoni E, Périn C. 2011. Insertions within Os01g09550.

2010

Dereeper A, Audic S, Claverie J-M, Blanc G. 2010. BLAST-EXPLORER helps you building datasets for phylogenetic analysis.. BMC evolutionary biology. 10:8. Abstract

Houel C, Bounon R, Chaïb J, Guichard C, Péros J-P, Bacilieri R, Dereeper A, Canaguier A, Lacombe T, N'Diaye A et al.. 2010. Patterns of sequence polymorphism in the fleshless berry locus in cultivated and wild Vitis vinifera accessions.. BMC plant biology. 10:284. Abstract

Hippolyte I, Bakry F, Seguin M, Gardes L, Rivallan R, Risterucci AM, Jenny C, Perrier X, Carreel F, Argout X et al.. 2010. A saturated SSR/DArT linkage map of Musa acuminata addressing genome rearrangements among bananas. BMC Plant Biology. 10(1):65.

Garsmeur O, Charron C, Bocs S, Jouffe V, Samain S, Couloux A, Droc G, Zini C, Glaszmann JC, Van Sluys M-A et al.. 2010. High homologous gene conservation despite extreme autopolyploid redundancy in sugarcane. New Phytologist. 189(2):629-642.

Rouard M, Guignon V, Aluome C, Laporte M-A, Droc G, Walde C, Zmasek CM, Périn C, Conte MG. 2010. GreenPhylDB v2.0: comparative and functional genomics in plants. Nucleic Acids Research. Abstract