Pierre Larmande
Institute:
IRD
Public e-mail:
pierre [dot] larmande [at] ird [dot] fr Research Interests:
Data Integration, Functional Genomics, Ontologies, Semantic Web
Custom message:
More info at my Homepage : https://sites.google.com/site/larmandepierre
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König-Ries B, Walls R, Kattge J, Benbernou S, Sack H, Arnaud E, Mougenot I, Larmande P, Karampiperis P, Todorov K et al..
Submitted. S4BIODIV : Semantic for Biodiversity workshop. 1933
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Ngompé GT, Venkatesan A, El Hassouni N, Ruiz M, Larmande P.
Submitted. {AgroLD} {API}. An {API}-centric approach towards knowledge extraction in the agronomic linked data knowledge base,{AgroLD} {API}. Une architecture orientée services pour l?extraction de connaissances dans la base de données liées {AgroLD} 21:133–157.
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Luyen LN, Tireau A, Venkatesan A, Neveu P, Larmande P.
Submitted. Development of a knowledge system for big data: Case study to plant phenotyping data. 13-15-June-2016
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Jonquet C, Toulet A, Arnaud E, Aubin S, Dzalé Yeumo E, Emonet V, Graybeal J, Laporte M-A, Musen MA, Pesce V et al..
2018. AgroPortal: A vocabulary and ontology repository for agronomy. Computers and Electronics in Agriculture. 144:126-143.
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Cohen-Boulakia S, Belhajjame K, Collin O, Chopard J, Froidevaux C, Gaignard A, Hinsen K, Larmande P, Bras YL, Lemoine F et al..
2017. Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities. Future Generation Computer Systems. 75:284-298.
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König-Ries B, Walls R, Kattge J, Benbernou S, Sack H, Arnaud E, Mougenot I, Larmande P, Karampiperis P, Todorov K et al..
2017. Preface. CEUR Workshop Proceedings. 1933
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Ngompé GT, Venkatesan A, El Hassouni N, Ruiz M, Larmande P.
2016. AgroLD API. An API-centric approach towards knowledge extraction in the agronomic linked data knowledge base,AgroLD API. Une architecture orientée services pour l?extraction de connaissances dans la base de données liées AgroLD Ingenierie des Systemes d{'}Information. 21:133-157.
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Jonquet C, Toulet A, Arnaud E, Aubin S, Yeumo ED, Emonet V, Graybeal J, Musen MA, Pommier C, Larmande P.
2016. Reusing the NCBO BioPortal technology for agronomy to build AgroPortal. CEUR Workshop Proceedings. 1747
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Zevio S, El Hassouni N, Ruiz M, Larmande P.
2016. AgroLD indexing tools with ontological annotations. CEUR Workshop Proceedings. 1795
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Luyen LN, Tireau A, Venkatesan A, Neveu P, Larmande P.
2016. Development of a knowledge system for big data: Case study to plant phenotyping data. ACM International Conference Proceeding Series. 13-15-June-2016
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Venkatesan A, El Hassouni N, Phillipe F, Pommier C, Quesneville H, Ruiz M, Larmande P.
2015. Exposing French agronomic resources as Linked Open Data. CEUR Workshop Proceedings. 1546:205-207.
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Lorieux M, Blein M, Lozano J, Bouniol M, Droc G, Dievart A, Périn C, Mieulet D, Lanau N, Bès M et al..
2012. In-depth molecular and phenotypic characterization in a rice insertion line library facilitates gene identification through reverse and forward genetics approaches.. Plant biotechnology journal. 10(5):555-68. Abstract
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Maillol V, Bacilieri R, Bocs S, Boursiquot J-M, Carrier G, Dereeper A, Droc G, Fleury C, Larmande P, Lecunff L et al..
2012. Role of Galaxy in a bioinformatic plant breeding platform. Galaxy Community Conference.
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Wollbrett J, Larmande P, Ruiz M.
2012. Semi-automatic generation of Semantic Web Services for relational biological databases. CEUR Workshop Proceedings. 952
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Droc G, Perin C, Fromentin S, Larmande P.
2009. {OryGenesDB} 2008 update: database interoperability for functional genomics of rice. Nucleic Acids Research. 37:D992–D995.
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Droc G, Périn C, Fromentin S, Larmande P.
2009. OryGenesDB 2008 update: database interoperability for functional genomics of rice. Nucleic Acids Research. 37(Database i):D992-5-D992-5. Abstract
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Larmande P, Droc G, Fromentin S, Périn C.
2009. Orylink: A Personalized Integrated System for Functional Genomic Analysis. International Plant and Animal Genome Conference.
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Larmande P, Gay C, Lorieux M, Périn C, Bouniol M, Droc G, Sallaud C, Perez P, Barnola I, Biderre-Petit C et al..
2008. Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library.. Nucleic acids research. 36(Database issue):D1022-7. Abstract
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Larmande P, Gay C, Lorieux M, Perin C, Bouniol M, Droc G, Sallaud C, Perez P, Barnola I, Biderre-Petit C et al..
2007. Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library. Nucleic Acids Research. 36:D1022–D1027.
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Droc G, Ruiz M, Larmande P, Pereira A, Piffanelli P, Morel J-B, Dievart A, Courtois B, Guiderdoni E, Périn C.
2006. OryGenesDB: a database for rice reverse genetics. Nucleic Acids Research. 34(Database i):D736-40-D736-40. Abstract
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Larmande P, Tranchant-Dubreuil C, Regnier L, Mougenot I, Libourel T.
2006. Integration of Data Sources for Plant Genomics. ICEIS (1). :314-318.
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Larmande P, Tranchant-Dubreuil C, Regnier L, Mougenot I, Libourel T.
2006. Integration of data sources for plant genomics. ICEIS 2006 - 8th International Conference on Enterprise Information Systems, Proceedings. DISI:314-318.
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Droc G, Ruiz M, Larmande P, Pereira A, Piffanelli P, Morel JB, Dievart A, Courtois B, Guiderdoni E, Périn C.
2006. OryGenesDB: a database for rice reverse genetics.. Nucleic acids research.. 34
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Pugh T, Fouet O, Risterucci AM, Brottier P, Abouladze M, Deletrez C, Courtois B, Clement D, Larmande P, N'Goran JAK et al..
2004. A new cacao linkage map based on codominant markers: development and integration of 201 new microsatellite markers. Theor Appl Genet. 108:1151–1161.
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Sallaud C, Gay C, Larmande P, Bès M, Piffanelli P, Piégu B, Droc G, Regad F, Bourgeois E, Meynard D et al..
2004. High throughput T-DNA insertion mutagenesis in rice: a first step towards in silico reverse genetics. The Plant journal : for cell and molecular biology. 39(3):450-64. Abstract
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Pugh T, Fouet O, Risterucci AM, Brottier P, Abouladze M, Deletrez C, Courtois B, Clement D, Larmande P, N’Goran JAK et al..
2004. A new cacao linkage map based on codominant markers: development and integration of 201 new microsatellite markers. TAG. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 108(6):1151-61. Abstract
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Sallaud C, Meynard D, van Boxtel J, Gay C, Bès M, Brizard JP, Larmande P, Ortega D, Raynal M, Portefaix M et al..
2003. Highly efficient production and characterization of T-DNA plants for rice ( Oryza sativa L.) functional genomics. TAG. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 106(8):1396-408. Abstract
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Sallaud C, Meynard D, van Boxtel J, Gay C, Bès M, Brizard JP, Larmande P, Ortega D, Raynal M, Portefaix M et al..
2003. Highly efficient production and characterization of T-DNA plants for rice (Oryza sativa L.) functional genomics. Theoretical and Applied Genetics. 106:1396-1408.