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Managing high-density genotyping data with Gigwa

  • data management
  • genomic variations
  • MongoDB
  • web
Sempéré G, Larmande P, Rouard M.  2022.  Managing high-density genotyping data with Gigwa. Plant Bioinformatics. 2443
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metaXplor: an interactive viral and microbial metagenomic data manager

  • assignment
  • data management
  • metabarcoding
  • metagenomics
  • NoSQL
  • sample
  • sequence
  • shotgun
  • taxonomy
  • web
Sempéré G, Pétel A, Abbé M, Lefeuvre P, Roumagnac P, Mahé F, Baurens G, Filloux D.  2021.  metaXplor: an interactive viral and microbial metagenomic data manager. GigaScience. 10
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Gigwa v2—Extended and improved genotype investigator

  • BrAPI
  • GA4GH
  • genomic variations
  • HapMap
  • indel
  • interoperability
  • MongoDB
  • NoSQL
  • PLINK
  • REST
  • SNP
  • VCF
  • web
Sempéré G, Pétel A, Rouard M, Frouin J, Hueber Y, de Bellis F, Larmande P.  2019.  Gigwa v2—Extended and improved genotype investigator. GigaScience. 8
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