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Miscellaneous

Larmande P, Adrien P, Fabien DB, Guilhem S, Julien F, Mathieu R, Pierre L, Yann H. 2019. Supporting data for {"}Gigwa v2 – Extended and improved genotype investigator{"}. GigaScience Database.

Larmande P, Yeumo ED, Fulss R, Alaux M, Aubin S, Arnaud E, Baumann U, Cooper L, Davey R, Laporte M-A et al.. 2016. Wheat Data Interoperability Guidelines, Ontologies and User Cases. Research Data Alliance.

Journal Article

D’Hont A, Denoeud F, Aury J-M, Baurens F-C, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M et al.. 2012. The banana (Musa acuminata) genome and the evolution of monocotyledonous plants.. Nature. 488(7410):213-7. Abstract

Droc G, Larivière D, Guignon V, Yahiaoui N, This D, Garsmeur O, Dereeper A, Hamelin C, Argout X, Dufayard JF et al.. 2013. The Banana Genome Hub. Database. 2013 Abstract

Yeumo ED, Alaux M, Arnaud E, Aubin S, Baumann U, Buche P, Cooper L, Ćwiek-Kupczyńska H, Davey RP, Fulss RA et al.. 2017. Developing data interoperability using standards: A wheat community use case. F1000Research. 6:1843.

Yeumo ED, Alaux M, Arnaud E, Aubin S, Baumann U, Buche P, Cooper L, Ćwiek-Kupczyńska H, Davey RP, Fulss RA et al.. Submitted. Developing data interoperability using standards: A wheat community use case. 6:1843.

Larmande P, Yeumo ED, Alaux M, Arnaud E, Aubin S, Baumann U, Buche P, Cooper L, Ćwiek-Kupczyńska H, Davey RP et al.. 2017. Developing data interoperability using standards: A wheat community use case [version 2; referees: 2 approved].

Jourda C, Cardi C, Mbéguié-A-Mbéguié D, Bocs S, Garsmeur O, D'Hont A, Yahiaoui N. 2014. Expansion of banana (Musa acuminata) gene families involved in ethylene biosynthesis and signalling after lineage-specific whole-genome duplications.. The New phytologist. 202(3):986-1000. Abstract

Bruskiewich R, Senger M, Davenport G, Ruiz M, Rouard M, Hazekamp T, Takeya M, Doi K, Satoh K, Costa M et al.. 2008. The generation challenge programme platform: semantic standards and workbench for crop science.. International journal of plant genomics. 2008:369601. Abstract

Martin G, Cardi C, Sarah G, Ricci S, Jenny C, Fondi E, Perrier X, Glaszmann J-C, D'Hont A, Yahiaoui N. 2020. Genome ancestry mosaics reveal multiple and cryptic contributors to cultivated banana. The Plant Journal.

Cai J, Liu X, Vanneste K, Proost S, Tsai W-C, Liu K-W, Chen L-J, He Y, Xu Q, Bian C et al.. 2014. The genome sequence of the orchid Phalaenopsis equestris. Nature Genetics. 47(1):65-72.

Amselem J, Cuomo CA, van Kan JAL, Viaud M, Benito EP, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S et al.. 2011. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.. PLoS genetics. 7(8):e1002230. Abstract

Guilhem S, Adrien P, Mathieu R, Julien F, Yann H, Fabien DB, Pierre L. Submitted. Gigwa v2 – Extended and improved genotype investigator. 8:giz051.

Sarah G, Homa F, Pointet S, Contreras S, Sabot F, Nabholz B, Santoni S, Sauné L, Ardisson M, Chantret N et al.. 2016. A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives.. Molecular ecology resources. Abstract

Baurens F-C, Bocs S, Rouard M, Matsumoto T, Miller RNG, Rodier-Goud M, Mbéguié-A-Mbéguié D, Yahiaoui N. 2010. Mechanisms of haplotype divergence at the RGA08 nucleotide-binding leucine-rich repeat gene locus in wild banana (Musa balbisiana). BMC Plant Biology. 10(1):149.

Ruas M, Guignon V, Sempere G, Sardos J, Hueber Y, Duvergey H, Andrieu A, Chase R, Jenny C, Hazekamp T et al.. 2017. MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data. Database. 2017(1)

Garsmeur O, Droc G, Antonise R, Grimwood J, Potier B, Aitken K, Jenkins J, Martin G, Charron C, Hervouet C et al.. 2018. A mosaic monoploid reference sequence for the highly complex genome of sugarcane.. Nature communications. 9(1):2638. Abstract

König-Ries B, Walls R, Kattge J, Benbernou S, Sack H, Arnaud E, Mougenot I, Larmande P, Karampiperis P, Todorov K et al.. 2017. Preface. CEUR Workshop Proceedings. 1933

Baurens F-C, Martin G, Hervouet C, Salmon F, Yohomé D, Ricci S, Rouard M, Habas R, Lemainque A, Yahiaoui N et al.. 2019. Recombination and large structural variations shape interspecific edible bananas genomes. Molecular biology and evolution. 36:97–111.

Jonquet C, Toulet A, Arnaud E, Aubin S, Yeumo ED, Emonet V, Graybeal J, Musen MA, Pommier C, Larmande P. 2016. Reusing the NCBO BioPortal technology for agronomy to build AgroPortal. CEUR Workshop Proceedings. 1747

Jonquet C, Toulet A, Arnaud E, Aubin S, Yeumo ED, Emonet V, Graybeal J, Musen MA, Pommier C, Larmande P. Submitted. Reusing the {NCBO} {BioPortal} technology for agronomy to build {AgroPortal}. 1747

P C, C T-D, AC T, C M, MN N, K L, C C, S E, N S, B R et al.. 2018. The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes.. Current biology : CB.

König-Ries B, Walls R, Kattge J, Benbernou S, Sack H, Arnaud E, Mougenot I, Larmande P, Karampiperis P, Todorov K et al.. Submitted. S4BIODIV : Semantic for Biodiversity workshop. 1933

Piyatrakul P, Yang M, Putranto R-A, Pirrello J, Dessailly F, Hu S, Summo M, Theeravatanasuk K, Leclercq J, Kuswanhadi et al.. 2014. Sequence and Expression Analyses of Ethylene Response Factors Highly Expressed in Latex Cells from Hevea brasiliensis. PLoS ONE. 9(6):e99367-. Abstract

Piyatrakul P, Yang M, Putranto R-A, Pirrello J, Dessailly F, Hu S, Summo M, Theeravatanasuk K, Leclercq J, Leclercq J et al.. 2014. Sequence and expression analyses of ethylene response factors highly expressed in latex cells from Hevea brasiliensis.. PloS one. 9(6):e99367. Abstract