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Venkatesan A, Ngompe GT, El Hassouni N, Chentli I, Guignon V, Jonquet C, Ruiz M, Larmande P. Submitted. Agronomic Linked Data ({AgroLD}): A knowledge-based system to enable integrative biology in agronomy. 13:1–17. Abstract

Nti-Addae Y, Matthews D, Ulat VJ, Syed R, Sempere G, Petel A, Renner J, Larmande P, Guignon V, Jones E et al.. Submitted. Benchmarking Database Systems for Genomic Selection Implementation. :baz096. Abstract

Luyen LN, Tireau A, Venkatesan A, Neveu P, Larmande P. Submitted. Development of a knowledge system for big data: Case study to plant phenotyping data. 13-15-June-2016

Do H, Than K, Larmande P. Submitted. Evaluating Named-Entity Recognition Approaches in Plant Molecular Biology. Multi-disciplinary Trends in Artificial Intelligence. :219–225. Abstract

A S, {CK} C, L M, R M, P L, N A, {RA} W, {KL} {MN}, H Q, D E. Submitted. Progress in single-access information systems for wheat and rice crop improvement..

V J, A D, N B, G D, J D, JR M, JP P, L M, L T, J L et al.. Submitted. Rice Galaxy: an open resource for plant science.

V J, A D, N B, G D, J D, JR M, JP P, L M, L T, J L et al.. Submitted. Rice Galaxy: an open resource for plant science. 8:giz028.

Cubry P, Tranchant-Dubreuil C, Thuillet A-C, Monat C, Ndjiondjop M-N, Labadie K, Cruaud C, Engelen S, Scarcelli N, Rhoné B et al.. Submitted. The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes. 28:2274–2282.e6. Abstract

König-Ries B, Walls R, Kattge J, Benbernou S, Sack H, Arnaud E, Mougenot I, Larmande P, Karampiperis P, Todorov K et al.. Submitted. S4BIODIV : Semantic for Biodiversity workshop. 1933

Harper L, Campbell J, Cannon EKS, Jung S, Poelchau M, Walls R, Andorf C, Arnaud E, Berardini TZ, Birkett C et al.. Submitted. {AgBioData} consortium recommendations for sustainable genomics and genetics databases for agriculture. 2018 Abstract

Ngompé GT, Venkatesan A, El Hassouni N, Ruiz M, Larmande P. Submitted. {AgroLD} {API}. An {API}-centric approach towards knowledge extraction in the agronomic linked data knowledge base,{AgroLD} {API}. Une architecture orientée services pour l?extraction de connaissances dans la base de données liées {AgroLD} 21:133–157.

Abbeloos R, Vasques Costa B, Edwards JD, Papoutsoglou E, Finkers R, Verouden M, Robbins K, Selby P, Glaser P, Sun Q et al.. Submitted. {BrAPI} - an Application Programming Interface for Plant Breeding Applications. Abstract

2020

B G, NQ H, D P, A B, K C, P T, P L, A D. 2020. COMOKIT: A Modeling Kit to Understand, Analyze, and Compare the Impacts of Mitigation Policies Against the COVID-19 Epidemic at the Scale of a City.. Frontiers in public health.

2019

V J, A D, N B, G D, J D, JR M, JP P, L M, L T, J L et al.. 2019. Corrigendum to: Rice Galaxy: an open resource for plant science.. GigaScience.

2018

Venkatesan A, Ngompe GT, El Hassouni N, Chentli I, Guignon V, Jonquet C, Ruiz M, Larmande P. 2018. Agronomic Linked Data ({AgroLD}): a Knowledge-based System to Enable Integrative Biology in Agronomy.

P C, C T-D, AC T, C M, MN N, K L, C C, S E, N S, B R et al.. 2018. The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes.. Current biology : CB.

A S, CK C, L M, R M, P L, N A, RA W, KL MN, H Q, D E. 2018. Progress in single-access information systems for wheat and rice crop improvement.. Briefings in bioinformatics.

Larmande P, Venkatesan A, Zhang L, Ngompe GT, El Hassouni N, Chentli I, Guignon V, Jonquet C, Ruiz M, Larmande P. 2018. Agronomic Linked Data (AgroLD): A knowledge-based system to enable integrative biology in agronomy. PLOS ONE.

Larmande P, Alexis D, Beth P, Gabriel Z, Gaetan D, Jan LE, Jason H, Jillian L, John MR, Jon PP et al.. 2018. Supporting data for {"}Rice Galaxy: an open resource for plant science{"}. GigaScience Database.

2017

Ruas M, Guignon V, Sempere G, Sardos J, Hueber Y, Duvergey H, Andrieu A, Chase R, Jenny C, Hazekamp T et al.. 2017. MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data. Database. 2017(1)

König-Ries B, Walls R, Kattge J, Benbernou S, Sack H, Arnaud E, Mougenot I, Larmande P, Karampiperis P, Todorov K et al.. 2017. Preface. CEUR Workshop Proceedings. 1933

2016

Sarah G, Homa F, Pointet S, Contreras S, Sabot F, Nabholz B, Santoni S, Sauné L, Ardisson M, Chantret N et al.. 2016. A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives.. Molecular ecology resources. Abstract

Clément Y, Sarah G, Holtz Y, Homa F, Pointet S, Contreras S, Nabholz B, Sabot F, Sauné L, Ardisson M et al.. 2016. Evolutionary forces affecting synonymous variations in plant genomes. bioRxiv. :086231.

Nicolas SD, Péros J-P, Lacombe T, Launay A, Le Paslier M-C, Bérard A, Mangin B, Valière S, Martins F, Le Cunff L et al.. 2016. Genetic diversity, linkage disequilibrium and power of a large grapevine (Vitis vinifera L) diversity panel newly designed for association studies. BMC plant biology. 16:74.

Ngompé GT, Venkatesan A, El Hassouni N, Ruiz M, Larmande P. 2016. AgroLD API. An API-centric approach towards knowledge extraction in the agronomic linked data knowledge base,AgroLD API. Une architecture orientée services pour l?extraction de connaissances dans la base de données liées AgroLD Ingenierie des Systemes d{'}Information. 21:133-157.