Bibliography
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{
Do Q, Hai HB, Larmande P.
2020. {PyRice}: a Python package for querying Oryza Sativa databases. Bioinformatics.
Droc G.
2006. {OryGenesDB}: a database for rice reverse genetics. Nucleic Acids Research. 34:D736–D740.
Droc G, Perin C, Fromentin S, Larmande P.
2009. {OryGenesDB} 2008 update: database interoperability for functional genomics of rice. Nucleic Acids Research. 37:D992–D995.
W
Larmande P, Yeumo ED, Fulss R, Alaux M, Aubin S, Arnaud E, Baumann U, Cooper L, Davey R, Laporte M-A et al..
2016. Wheat Data Interoperability Guidelines, Ontologies and User Cases. Research Data Alliance.
U
T
Mieulet D, Jolivet S, Rivard M, Cromer L, Vernet A, Mayonove P, Pereira L, Droc G, Courtois B, Guiderdoni E et al..
2016. Turning rice meiosis into mitosis. Cell Research.
Dufayard JF, Duret L, Penel S, Gouy M, Rechenmann F, Perrière G.
2005. Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases.. Bioinformatics (Oxford, England). 21(11):2596-603. Abstract
Carrier G, Le Cunff L, Dereeper A, Legrand D, Sabot F, Bouchez O, Audeguin L, Boursiquot J-M, This P.
2012. Transposable elements are a major cause of somatic polymorphism in Vitis vinifera L.. PloS one. 7(3):e32973. Abstract
Chabannes M, Baurens F-C, Duroy P-O, Bocs S, Vernerey M-S, Rodier-Goud M, Barbe V, Gayral P, Iskra-Caruana M-L.
2013. Three infectious viral species lying in wait in the banana genome.. Journal of virology. 87(15):8624-37. Abstract
Ahmadi N, Negrão S, Katsantonis D, Frouin J, Ploux J, Letourmy P, Droc G, Babo P, Trindade H, Bruschi G et al..
2011. Targeted association analysis identified japonica rice varieties achieving Na+/K+ homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra. Theoretical and Applied Genetics. 123:881-895.
Ahmadi N, Negrão S, Katsantonis D, Frouin J, Ploux J, Letourmy P, Droc G, Babo P, Trindade H, Bruschi G et al..
2011. Targeted association analysis identified japonica rice varieties achieving Na(+)/K (+) homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra.. TAG. Theoretical and applied genetics. 123(6):881-95. Abstract
S
Souza GM, Berges H, Bocs S, Casu R, D’Hont A, Ferreira JE, Henry R, Ming R, Potier B, Van Sluys M-A et al..
2011. The Sugarcane Genome Challenge: Strategies for Sequencing a Highly Complex Genome. Tropical Plant Biology. 4:145-156.
Guignon V, Hueber Y, Rouard M, Bocs S, Couvin D, de Lamotte F, Droc G, Dufayard JF, El Hassouni N, Farcy C et al..
2016. The South Green portal: A comprehensive resource for tropical and Mediterranean crop genomics. Current Plant Biology. 7:6–9.
Peralta M, Combes M-C, Cenci A, Lashermes P, Dereeper A.
2013. SNiPloid: A Utility to Exploit High-Throughput SNP Data Derived from RNA-Seq in Allopolyploid Species. International Journal of Plant Genomics. 2013 Abstract