Francois Sabot

Institute:

IRD

Public e-mail:

francois [dot] sabot [at] ird [dot] fr

Research Interests:

Genome Structure and Genome Ecology

Species of interest:

African rice, Rice

Projects: ARCAD

Publication(s):

1.

Cubry P, Tranchant-Dubreuil C, Thuillet A-C, Monat C, Ndjiondjop M-N, Labadie K, Cruaud C, Engelen S, Scarcelli N, Rhoné B et al.. Submitted. The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes. 28:2274–2282.e6. Abstract

2.

Sarah G, Homa F, Pointet S, Contreras S, Sabot F, Nabholz B, Santoni S, Sauné L, Ardisson M, Chantret N et al.. 2016. A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives.. Molecular ecology resources. Abstract

3.

Clément Y, Sarah G, Holtz Y, Homa F, Pointet S, Contreras S, Nabholz B, Sabot F, Sauné L, Ardisson M et al.. 2016. Evolutionary forces affecting synonymous variations in plant genomes. bioRxiv. :086231.

4.

Monat C, Tranchant-Dubreuil C, Kougbeadjo A, Farcy C, Ortega-Abboud E, Amanzougarene S, Ravel S, Agbessi M, Orjuela-Bouniol J, Summo M et al.. 2015. TOGGLE: Toolbox for generic NGS analyses. JOBIM.

5.

Sabot F. 2014. Tos17 rice element: incomplete but effective.. Mobile DNA. 5(1):10. Abstract

6.

Nabholz B, Sarah G, Sabot F, Ruiz M, Adam H, Nidelet S, Ghesquière A, Santoni S, David J, Glémin S. 2014. Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (O. glaberrima). Molecular Ecology. :n/a-n/a.

7.

Monat C, Tranchant-Dubreuil C, Lorieux M, Ghesquière A, Ruiz M, Sabot F. 2014. African Rices Genome Projects : GLASS and Irigin. PAG XXII. Abstract

8.

Carrier G, Le Cunff L, Dereeper A, Legrand D, Sabot F, Bouchez O, Audeguin L, Boursiquot J-M, This P. 2012. Transposable elements are a major cause of somatic polymorphism in Vitis vinifera L.. PloS one. 7(3):e32973. Abstract

9.

Argout X, Salse J, Aury J-M, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN et al.. 2011. The genome of Theobroma cacao. Nature Genetics. 43(2):101-108.

10.

Petit J, Bourgeois E, Stenger W, Bès M, Droc G, Meynard D, Courtois B, Ghesquière A, Sabot F, Panaud O et al.. 2009. Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus. Molecular Genetics and Genomics. 282(6):633-652.