South Green Publications
2008
Ventelon-Debout M, Tranchant-Dubreuil C, Nguyen T-, Bangratz M, Siré C, Delseny M, et al. Rice yellow mottle virus stress responsive genes from susceptible and tolerant rice genotypes. BMC plant biology. 2008;8:26.
Conte MG, Gaillard S, Lanau N, Rouard M, Périn C. GreenPhylDB: a database for plant comparative genomics. Nucleic Acids Res. 2008;36(Database issue):D991-8. Abstract
Ballini E, Morel J-, Droc G, Price A, Courtois B, Jean-Loup, et al. A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance. Molecular Plant-Microbe Interactions: MPMI. 2008;21:859-68. Abstract
Bruskiewich R, Senger M, Davenport G, Ruiz M, Rouard M, Hazekamp T, et al. The generation challenge programme platform: semantic standards and workbench for crop science. Int J Plant Genomics. 2008;2008:369601. Abstract
Wanchana S, Thongjuea S, Ulat VJ, Anacleto M, Mauleon R, Conte MG, et al. The Generation Challenge Programme comparative plant stress-responsive gene catalogue. Nucleic Acids Research. 2008;36(suppl 1):D943-D946. Abstract
Vergne E, Ballini E, Droc G, Tharreau D, Jean-Loup, Morel J-. ARCHIPELAGO: a dedicated resource for exploiting past, present, and future genomic data on disease resistance regulation in rice. Molecular Plant-Microbe Interactions: MPMI. 2008;21(7):869-78. Abstract
Pelletier E, Kreimeyer A, Bocs S, Rouy Z, Gyapay G, Chouari R, et al. "Candidatus Cloacamonas acidaminovorans": genome sequence reconstruction provides a first glimpse of a new bacterial division. J Bacteriol. 2008;190(7):2572-9. Abstract
Dereeper A, Guignon V, Blanc G, Audic S, Buffet S, Chevenet F, et al. Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucl. Acids Res.. 2008;36:W465-469. Abstract
Larmande P, Gay C, Lorieux M, Périn C, Bouniol M, Droc G, et al. Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library. Nucleic Acids Res. 2008;36(Database issue):D1022-7. Abstract
Lescot M, Piffanelli P, Ciampi AY, Ruiz M, Blanc G, Leebens-Mack J, et al. Insights into the Musa genome: syntenic relationships to rice and between Musa species. BMC Genomics. 2008;9:58. Abstract
2007
Argout X, Ruiz M, Rouard M, Turnbull C, Lanaud C, Rosenquist E, et al. CocoaGen DB: a Web portal for crossing cocoa phenotypic, genetic and genomic data from ICGD and TropGeneDB databases.. In: 15th International Cocoa Research Conference. Vol 1. San Jose, Costa Rica; 2007. p. 515-8.
Argout X, Ruiz M, Fouet O, Lanaud C, Wincker P, Da Silva C, et al. ESTtik : a semi-automatic cDNA sequence analysis and annotation pipeline including SSR and SNP search tools.. In: 15th International Cocoa Research Conference. Vol 1. San Jose, Costa Rica; 2007. p. 501-6.
Hamelin C, Ruiz M, Argout X. TropGENE-DB, a multi-tropical crop information system. In: 4th International Workshop DILS. Philadelphia, USA; 2007.
Lanaud C, Fouet O, Gramacho KP, Argout X, Legavre T, Sabau X, et al. A large EST resource for theobroma cacao L. In: 15th Plant and Animal Genomes Conference. San Diego, USA; 2007.
Terol J, Conesa A, Colmenero JM, Cercos M, Tadeo F, Agusti J, et al. Analysis of 13000 unique Citrus clusters associated with fruit quality, production and salinity tolerance. BMC Genomics. 2007;8:31. Abstract
Larmande P, Gay C, Lorieux M, Perin C, Bouniol M, Droc G, et al. Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library. Nucleic Acids Research. 2007;36:D1022-D1027.
Vergne E, Ballini E, Marques S, Mammar SB, Droc G, Gaillard S, et al. Early and specific gene expression triggered by rice resistance gene Pi33 in response to infection by ACE1 avirulent blast fungus. The New phytologist. 2007;174(1):159-71. Abstract
Piffanelli P, Droc G, Mieulet D, Lanau N, Bès M, Bourgeois E, et al. Large-scale characterization of Tos17 insertion sites in a rice T-DNA mutant library. Plant Mol Biol. 2007. Abstract
Dereeper A, Argout X, Billot C, Rami JF, Ruiz M. SAT, a flexible and optimized Web application for SSR marker development. BMC Bioinformatics. 2007;8:465. Abstract
2006
Droc G, Ruiz M, Larmande P, Pereira A, Piffanelli P, Morel J-, et al. OryGenesDB: a database for rice reverse genetics. Nucleic Acids Research. 2006;34(Database i):D736-40 - D736-40. Abstract
Droc G, Ruiz M, Larmande P, Pereira A, Piffanelli P, Morel JB, et al. OryGenesDB: a database for rice reverse genetics. Nucleic acids research.. 2006;34.
Larmande P, Tranchant-Dubreuil C, Regnier L, Mougenot I, Libourel T. Integration of data sources for plant genomics. ICEIS 2006 - 8th International Conference on Enterprise Information Systems, Proceedings. 2006;DISI:314-8.
